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Table 1 Microarray Suite analysis of gene regulation in normal vs. tumor cells in response to 18 hr arginine deprivation.

From: Short-term arginine deprivation results in large-scale modulation of hepatic gene expression in both normal and tumor cells: microarray bioinformatic analysis

CODE CELL TYPE ARG STATUS ABSENT PRESENT NET INCREASE NET DECREASE MARGINAL NO CHANGE
N1 NORMAL Arg + 7189 8474     
N3 " Arg + 7102 8536     
N5 " Arg + 7010 8662     
N2 " Arg deficient 7140 8532 1242 876 135 6221
N4 " Arg deficient 7296 8381 358 136 52 7990
N6 " Arg deficient 6601 9082 832 811 105 6914
MEAN Normal   7106 8611 811 608 97 7042
AVEDEV    167 174 302 314 30 632
T1 TUMOR Arg + 7085 8535     
T3 " Arg + 7051 8607     
T5 " Arg + 7423 8224     
T2 " Arg deficient 6934 8725 1514 1187 119 5715
T4 " Arg deficient 7664 7973 1391 913 117 6186
T6 " Arg deficient 7573 8065 843 678 86 6617
MEAN Tumor   7288 8355 1249 926 109 6173
AVEDEV    265 268 271 174 14 305
  1. Numbers of rat genes in Affymetrix RAE 230 array demonstrating expression, no change, increase, decrease and marginal change. Change in gene expression based on p value of 0.05 or less in pair-wise comparisons of three independent datasets. RAE 230 array contains 15,923 genes.