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Table 1 Gene name, gene locus and gene product used in GeXP multiplex analysis of antioxidant and oxidative stress related genes in rat liver

From: Gamma-oryzanol rich fraction regulates the expression of antioxidant and oxidative stress related genes in stressed rat's liver

Gene Name

Gene Locus

Gene Product/Description

Function

Ubb

NM_138895

Ubiquitin B

Mediates ATP-dependent degradation (stress response-related gene)

18S a

BC168964

18S

Housekeeping genes

Nfkbib

NM_030867

Nuclear factor of kappa light polypeptide

Stress response-related gene

Akr1b1

NM_012498

Aldo-keto reductase family 1, member B1

Stress response-related gene

Grm5

NM_017012

Glutamate receptor, metabotropic5

Stress response-related gene

Apo E

NM_138828

Apolipoprotein E

Lipid metabolism(stress response-related gene)

Stip1

NM_138911

Stress-induced phosphoprotein 1

Stress response-related gene

Cox11

NM_001109575

COX11 homolog, cytochrome c oxidase

Oxidation

(Mt1a)

NM_138826

Metallothionein 1a

Stress response-related gene

Oxsr1

NM_001108194

Oxidative-stress responsive 1

Stress response-related gene

GPX

NM_183403

Glutathione peroxidase 2

Antioxidant

Gapdhs a

NM_023964

Glyceraldehyde-3-phosphate dehydrogenase

Housekeeping genes

SOD1

NM_017050

Superoxide dismutase 1,

Antioxidant

Hao1

NM_001107780

Hydroxyacid oxidase 1, liver

Stress response-related gene

NADH

NM_001130505

NADH dehydrogenase

Nuclear gene encoding mitochondrial protein (stress response-related gene)

Actb a

NM_031144

actin, beta

Housekeeping genes

CAT

NM_012520

catalase

Antioxidant

Knar b

  

Internal control

  1. a Gene used for normalization
  2. b Internal control