Skip to main content

Table 2 Gene name, gene product size, and forward and reverse primer sequences used in GeXP assays of antioxidant and oxidative stress related genes in rat liver

From: Gamma-oryzanol rich fraction regulates the expression of antioxidant and oxidative stress related genes in stressed rat's liver

Gene Name

Fragment Size

Left Sequence w/Universals

Right Sequence w/Universals

Ubb

187

AGGTGACACTATAGAATAGACACCATCGAGAACGTGAA

GTACGACTCACTATAGGGAGACAAGGTGCAGGGTTGACT

18S a

194

AGGTGACACTATAGAATAGCTCCAGGACGGAGTTCATA

GTACGACTCACTATAGGGACAGCAGGTGGAGCTCTGATT

Nfkbib

204

AGGTGACACTATAGAATACCCGAGGATGAGGATGATAA

GTACGACTCACTATAGGGATCATCAGGAAGAGGTTTGGC

Akr1b1

210

AGGTGACACTATAGAATACGCAGAAGTCTGAAGCTGTG

GTACGACTCACTATAGGGACTGGTACTGCCCTCCACATT

Grm5

213

AGGTGACACTATAGAATAGCCAACTTTAATGAGGCCAA

GTACGACTCACTATAGGGATGATGTACACCTTCGGGACA

Apo E

230

AGGTGACACTATAGAATAGAAGATGAAGGCTCTGTGGG

GTACGACTCACTATAGGGACTCTGCAGCTCTTCCTGGAC

Stip1

236

AGGTGACACTATAGAATAACTACAACAAATGCCGGGAG

GTACGACTCACTATAGGGATGGCACTTCTTGAGCACATC

Cox11

244

AGGTGACACTATAGAATACTTCCTTCCCCCATCTGTTT

GTACGACTCACTATAGGGACTGTTCCTCACAATGGCTCA

(Mt1a)

250

AGGTGACACTATAGAATACACCAGATCTCGGAATGGAC

GTACGACTCACTATAGGGAACTGTTCGTCACTTCAGGCA

Oxsr1

257

AGGTGACACTATAGAATACAGCGATTGAACTAGCCACA

GTACGACTCACTATAGGGATTGTGCCTCAACAGTTCTGC

GPX

271

AGGTGACACTATAGAATATCAACATCGAGCCTGACATC

GTACGACTCACTATAGGGACAGACTTAGAGCCCCCAGTG

Gapdh a

279

AGGTGACACTATAGAATAATCAATGGATTTGGACGCAT

GTACGACTCACTATAGGGAAGCTCCAGGGGATTTCCTTA

SOD1

285

AGGTGACACTATAGAATACTTGCTTTTTGCTCTCCCAG

GTACGACTCACTATAGGGAAAAATGAGGTCCTGCAGTGG

Hao1

293

AGGTGACACTATAGAATACCTGTCAGACCATGGGAACT

GTACGACTCACTATAGGGATGAGCTGTGGTGGTAGCTTG

NADH

298

AGGTGACACTATAGAATAGTGAAGCCCATTTTCAGTCG

GTACGACTCACTATAGGGATAATGTGTGTCCGCTGCTTC

Actb a

307

AGGTGACACTATAGAATAATGTACGTAGCCATCCAGGC

GTACGACTCACTATAGGGAAGGGCAACATAGCACAGCTT

Cat

314

AGGTGACACTATAGAATAGTGGTTTTCACCGACGAGAT

GTACGACTCACTATAGGGACACGAGGTCCCAGTTACCAT

Knar b

325

AGGTGACACTATAGAATAATCATCAGCATTGCATTCGATTCCTGTTTG

GTACGACTCACTATAGGGAATTCCGACTCGTCCAACATC

  1. a Gene used for normalization
  2. b Internal control