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Table 2 Association of the lipoprotein lipase single nucleotide polymorphisms (SNPs) with HDL-C levels

From: High fat diet modifies the association of lipoprotein lipase gene polymorphism with high density lipoprotein cholesterol in an Asian Indian population

Association of the SNPs with HDL-C levels (continuous variable)

SNP

HDL-C levels (means ± SD)

SNP rs4922115

 GG

1.1 ± 0.3

 GA

1.1 ± 0.2

 AA

1.1 ± 0.2

Dominant model (GG vs GA + AA) (P value)

0.02

SNP rs1121923

 CC

1.1 ± 0.3

 CT

1.2 ± 0.3

 TT

1.0 ± 0.2

Dominant model (CC vs CT + TT) (P value)

0.02

SNP rs328

 CC

1.1 ± 0.3

 CG

1.2 ± 0.3

 GG

1.2 ± 0.2

Dominant model (CC vs CG + GG) (P value)

0.0004

SNP rs285

 CC

1.1 ± 0.3

 CT

1.1 ± 0.2

 TT

1.2 ± 0.2

Dominant model (CC vs CT + TT) (P value)

0.03

Association of the SNPs with HDL-C (categorical variable)

 

Low HDL-C levels Number (%)

Normal HDL-C levels Number (%)

SNP rs4922115

 GG

366 (65%)

497 (71.3%)

 GA

171 (30.4%)

167 (25.3%)

 AA

26 (4.6%)

24 (3.4%)

Dominant model (GG vs GA + AA) (P value)

0.02

SNP rs1121923

 CC

530 (91.7%)

642 (84.7%)

 CT

45 (7.8%)

112 (14.8%)

 TT

3 (0.5%)

4 (0.5%)

Dominant model (CC vs CT + TT) (P value)

0.1

SNP rs328

 CC

336 (78.3%)

540 (69.8%)

 CG

88 (20.5%)

215 (27.8%)

 GG

5 (1.2%)

19 (2.5%)

Dominant model (CC vs CG + GG) (P value)

0.001

SNP rs285

 CC

336 (45.6%)

421 (38%)

 CT

330 (44.8%)

515 (46.5%)

 TT

71 (9.6%)

171 (15.4%)

Dominant model (CC vs CT + TT) (P value)

0.001

  1. HDL-C High density lipoprotein cholesterol
  2. P values are adjusted for age, gender, body mass index, and Type 2 diabetes status
  3. Those p values that are in bold implicates those values that are significant after Bonferroni correction