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Table 2 GO analysis of predicted target genes of five validated C19MC miRNAs

From: Maternal obesity alters C19MC microRNAs expression profile in fetal umbilical cord blood

Subcategory

GO name

numbers

P-value

Targeted mRNA

positive regulation of phosphatidylinositol 3-kinase activity

GO:0043552

15

0.0005

CCR7, FGR, SRC, TNFAIP8L3, ATG14, ERBB4, FGFR3, FLT1, IRS1, PDGFB, PTK2B, PTK2, TGFB1, VAV2, VAV3

post-embryonic development

GO:0009791

22

0.017

ALX4, MORC3, PLAGL2, PRDM1, SMAD2, SOX6, TAL2, TIPARP, ACVR2B, ALDH5A1, AGO2, CHST11, EMX1, GABRG2, HEG1, ITPR1, IMPAD1, KMT2A, PYGO1, SZT2, SELENOP, SOD2

memory

GO:0007613

19

0.023

HTR2A, CHRFAM7A, NTAN1, SHANK2, CNR1, DRD1, EIF4EBP2, FEN1, HRH1, HRH2, ITGA3, KALRN, PAK5, PLA2G6, PLCB1, KCNK10, KCNK4, PPP3CB, SLC6A4,

response to hydrogen peroxide

GO:0042542

16

0.032

BAK1, SRC, CASP3, DUSP1, GLRX2, GPX1, HP, HMOX1, MB, NR4A3, PPP1R15B, PTK2B, STK25, STAT1, SOD2, SDC

T cell differentiation

GO:0030217

11

0.033

CD3D, SOX4, SP3, CHD7, IL7R, NHEJ1, PREX1, PIK3CD, PPP3CB, PTPN2, PTPN22

glucose homeostasis

GO:0042593

27

0.034

ALMS1, CSMD1, HECTD4, HNF1A, SOX4, VGF, ADIPOR2, CNR1, CAV3, CRY1, CRY2, DHPS, FBN1, HNF4A, HIF1A, INPP5K, IRS1, INSR, NEUROD1, PRCP, PRKAA1, PRKAA2, PTPN2, RBP4, SLC2A4, SLC8B1, TCF7L2

MAPK cascade

GO:0000165

60

0.038

BRAP, CCL5, FYN, JAK1, NDST1, RASGRP3, RASGRP4, RASA1, RASA2, RAF1, RASGEF1A, SHC3, ACTN2, CAMK2B, CAMK2D, CAMKK2, CALM3, CSF2RA, CSF2RB, DOK4, DOK5, DUSP5, DUSP7, EGFR, EREG, ERBB3, ERBB4, FGF19, FGF7, FGFR3, GRB2, ITPKB, IRS1, IL17RD, IL2RB, IL31RA, KLB, LRRK2, MAPK4, MAPK8IP2, MAPKAPK3, MEF2D, NRG1, NF1, PDGFB, PSMD1, PSMD5, PSME3, PSME4, PSMA2, PSMB4, PTK2B, PTK2, RET, SPTA1, SPTB, SPTBN1, SPRED1, TGFB1, MYC

nervous system development

GO:0007399

67

0.038

MTR, DGCR14, GPSM1, RFNG, RBM45, ARHGEF7, SMARCC1, WNT8B, ZIC5, ATXN10, ATXN3, CHRM2, CHRM3, CHRDL1, CPLX2, CRIM1, DPYSL5, DOK4, DOK5, DYRK1A, EDNRB, ERBB4, FEZ1, FEZ2, FGF19, FUT10, FKTN, GBX2, GMFB, GRIK1, GPM6B, GAS7, HDAC4, IGSF9B, INSC, KALRN, LSAMP, MPPED2, MARK4, MAP1B, MBNL1, MEF2D, NRG1, NLGN1, NAV2, NR2E1, PRPS1, PCSK2, PPP2R5D, PCDHA10, PCDHA11, PCDHA2, PCDHA4, PCDHA5, PCDHA8, SEMA6A, SRRM4, SHOX2, SIGMAR1, SCN8A, TSHR, TMEM41B, TPP1, TMOD2, ZEB2,

  1. Gene names and their numbers of predicted target mRNAs are listed in each GO subcategory. P value of < 0.05 was considered significant