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Table 2 Significantly modulated canonical pathways, molecular and cellular functions, and transcription regulators for low fat (LF)-specific, high fat (HF)-specific, meal-responsive, HF-delay, and LF-HF-different genes

From: Identification of the principal transcriptional regulators for low-fat and high-fat meal responsive genes in small intestine

 

LF-specific genes

HF-specific genes

Meal-responsive genes

HF-delay genes

LF-HF different genes

Top 3 canonical pathways

1

ERK5 signaling

Calcium signaling

Aldosterone signaling in epithelial cells

 

Glycerolipid metabolism

2

 

LXR/RXR activation

Protein ubiquitination pathway

 

Actin cytoskeleton signaling

3

 

LPS/IL-1 mediated inhibition of RXR function

   

Top 3 molecular and cellular functions

1

Carbohydrate metabolism

Lipid metabolism

Cellular function and maintenance

Lipid metabolism

Lipid metabolism

2

Cellular function and maintenance

Small molecule biochemistry

Post-translational modification

Molecular transport

Small molecule biochemistry

3

Cellular growth and proliferation

Molecular transport

Protein folding

Small molecule biochemistry

Molecular transport

Top 3 transcription regulators

1

CREB1

PPARA

FOXO1

RBPJL

NR5A2

2

CEBPB

SMAD3

AIP

PTF1A

RBPJL

3

FOXO1

PPARGC1A

HIF1A

MLX

Pdx1

  1. Abbreviations: AIP aryl-hydrocarbon receptor-interacting protein, CEBPB CCAAT/enhancer-binding protein beta, CREB1 cAMP responsive element binding protein 1, ERK5 extracellular signal regulated kinase 5, EPAS1 endothelial PAS domain-containing protein 1, FOXO1 forkhead box protein O1, HIF1A hypoxia-inducible factor 1 alpha subunit, IL-1 interleukin 1, LPS lipopolysaccharides, LXR liver X receptor, MLX Max-like protein X, NR4A1 nuclear receptor subfamily 4 group A member 1, NR5A2 nuclear receptor subfamily 5 group A member 2, Pdx1 pancreatic and duodenal homeobox 1, PPARA peroxisome proliferator-activated receptor alpha, PPARGC1A PPAR gamma coactivator 1-alpha, PTF1A pancreas transcription factor 1 subunit alpha, RBPJL recombination signal binding protein for immunoglobulin kappa J region-like, RXR retinoid X receptor