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Effects of orally applied butyrate bolus on histone acetylation and cytochrome P450 enzyme activity in the liver of chicken – a randomized controlled trial
Nutrition & Metabolism volume 10, Article number: 12 (2013)
Butyrate is known as histone deacetylase inhibitor, inducing histone hyperacetylation in vitro and playing a predominant role in the epigenetic regulation of gene expression and cell function. We hypothesized that butyrate, endogenously produced by intestinal microbial fermentation or applied as a nutritional supplement, might cause similar in vivo modifications in the chromatin structure of the hepatocytes, influencing the expression of certain genes and therefore modifying the activity of hepatic microsomal drug-metabolizing cytochrome P450 (CYP) enzymes.
An animal study was carried out in chicken as a model to investigate the molecular mechanisms of butyrate’s epigenetic actions in the liver. Broiler chicks in the early post-hatch period were treated once daily with orally administered bolus of butyrate following overnight starvation with two different doses (0.25 or 1.25 g/kg body weight per day) for five days. After slaughtering, cell nucleus and microsomal fractions were separated by differential centrifugation from the livers. Histones were isolated from cell nuclei and acetylation of hepatic core histones was screened by western blotting. The activity of CYP2H and CYP3A37, enzymes involved in biotransformation in chicken, was detected by aminopyrine N-demethylation and aniline-hydroxylation assays from the microsomal suspensions.
Orally added butyrate, applied in bolus, had a remarkable impact on nucleosome structure of hepatocytes: independently of the dose, butyrate caused hyperacetylation of histone H2A, but no changes were monitored in the acetylation state of H2B. Intensive hyperacetylation of H3 was induced by the higher administered dose, while the lower dose tended to increase acetylation ratio of H4. In spite of the observed modification in histone acetylation, no significant changes were observed in the hepatic microsomal CYP2H and CYP3A37 activity.
Orally added butyrate in bolus could cause in vivo hyperacetylation of the hepatic core histones, providing modifications in the epigenetic regulation of cell function. However, these changes did not result in alteration of drug-metabolizing hepatic CYP2H and CYP3A37 enzymes, so there might be no relevant pharmacoepigenetic influences of oral application of butyrate under physiological conditions.
Short chain fatty acids (SCFA) are produced physiologically by the anaerobic microbial fermentation of dietary compounds in the rumen of polygastric animals and mostly fibers in the large intestine of monogastric mammals, birds and humans. Butyrate is of special interest due to its numerous positive effects on the health of gut and extraintestinal tissues. Butyrate is the most important energy source of the colonocytes, regulating also the proliferation and differentiation of the gastrointestinal epithelium and inducing apoptosis in genetically disordered cells[4, 5]. As a consequence, butyrate has a protective effect against colorectal cancer, which was reported in some in vitro and also in vivo animal studies[7, 8]. Due to its selective antimicrobial action on most enteral pathogens[9, 10], butyrate improves the balance of the intestinal microflora, which can influence the health of the host animal or the human host.
Fiber-rich diet or uptake of resistant starch increases microbial butyrate production, but butyrate is also orally applicable in several forms. In animal nutrition, due to its numerous beneficial properties improving health and also the growth performance of pigs and chickens, butyrate is of special interest as a nutritional supplement, especially after the banning of the traditional antibiotical growth promoters in the European Union.
Furthermore, as an epigenetic factor, butyrate regulates the transcription via influencing core histone acetylation, which is one of the most relevant epigenetic regulations of the cell function together with DNA methylation. The dynamic balance of acetylation of histone proteins at certain lysine residues is regulated by the opposing effects of histone acetyltransferases (HAT) and histone deacetylases (HDAC). Butyrate inhibits Class I and most of the Class II HDAC enzymes, causing histone hyperacetylation at lysine residues of the N-terminal tail, therefore modifying the expression of certain genes. In addition to the several in vitro studies, increased total histone acetylation was reported in case of porcine caecal tissue after dietary supplementation with the butyrate precursor lactulose. Butyrate-induced histone modifications may be highly involved in butyrate’s antitumor, antibacterial and metabolic effects.
Although butyrate is greatly metabolized by the intestinal epithelium, a certain amount is also absorbed into the portal blood and taken up by the liver in rat and human in vivo[21, 22]. Butyrate is an important energy source for the liver as a substrate of the oxidative pathways, but it is also a potent effector of the hepatic metabolism. It can decrease the mitochondrial oxidative phosphorylation yield and the ATP content of the liver due to its uncoupling-like effect[23, 24] and can influence the mitochondrial ATP turnover linked to glycogen metabolism.
It is known that the expression of certain microsomal cytochrome P450 (CYP) monooxygenases, playing a predominant role in biotransformation, drug and steroid metabolism, can be affected by histone modifications. For instance, the HDAC inhibitor trichostatin A was shown to influence the in vitro expression of the CYP3A subfamily. Alimentary added inulin, which is fermented by the colonic bacteria to SCFA, alleviates the reduction in the expression and activity of hepatic CYP1A1/2 and CYP2E1 enzymes in rats kept on a high-fat diet, possibly due to the epigenetic effects of the absorbed SCFA. On the basis of these findings, the enteral microbiome-produced or the orally added butyrate may also alter the activity of CYP enzymes, have an impact on hepatic detoxification capacity and drug metabolism, defined as possible pharmacoepigenetic influences.
The present study aimed to evaluate the epigenetic effects of butyrate added orally to broiler chickens in a daily bolus. These animals have a large capacity of growing and intensive hepatic metabolism. Young chickens have quite low rates of butyrate production in the large intestine, so they can be proper candidates in order to study the effects of the orally applied butyrate. Unlike in our previous study with butyrate evenly mixed in the feedstuff of the chicken, butyrate administered in bolus after starvation provides a fast, but short-term release of greater amount of butyrate to the portal vein and an intensive stimulus for the liver. The lower dose of butyrate, 0.25 g/kg body weight (BW) was chosen regarding the usual applied concentration of butyrate as a nutritional supplement. With the higher administered concentration, 1.25 g/kg BW we aimed to provide high amount of butyrate for the hepatocytes to study also the dose-dependency of its action.
After butyrate treatments, at first we wanted to monitor the modifications in the acetylation state of hepatic core histones at the most frequent acetylation sites. Our second goal was to measure the activity of CYP2H and CYP3A37 enzymes to screen, whether butyrate in bolus can influence the detoxification capacity of the liver.
Chemicals were purchased from Sigma-Aldrich (Munich, Germany) except when otherwise specified.
One-day-old broiler chicks of the Ross 308 strain (mixed gender) were obtained from a commercial hatchery (Bábolna Tetra Company, Uraiújfalu, Hungary). Animals were housed individually in metal pens in a room with controlled environment conditions of Ross technology. Feed and water were provided ad libitum. The diet was formulated according to the requirements of the starter period and was free from any medication or chemical additives. Composition of the diet is shown in Table1.
All procedures were conducted in accordance with international and national laws and institutional guidelines and approved by the Local Animal Test Committee of the Faculty of Veterinary Science, Szent István University, Budapest, Hungary (number of permission: 22.1/4719/003/2008).
On days 20–24 experimental animals were fasted overnight for 12 h and thereafter treated once daily by a crop-tube with an intraingluvial bolus according to the following protocol: (i) ten chickens received 0.1 g/ml sodium butyrate solution (2.5 ml/kg BW, which equals 0.25 g sodium butyrate/kg BW daily, 1.25 g sodium butyrate/kg BW for the total treatment period, which is approx. 0.95 g/animal in average); (ii) ten broilers were treated with 0.5 g/ml sodium butyrate solution (2.5 ml/kg BW, which equals 1.25 g sodium butyrate/kg BW daily, 6.25 g sodium butyrate/kg BW for the total treatment period, which is approx. 4.75 g/animal in average); (iii) distilled water (2.5 ml/kg BW) was applied for ten chicks as a control group. The butyrate boli did not cause any macroscopic pathomorphological alterations in the mucosa of the gastrointestinal tract, which may have been caused by higher osmolarity of the applied solutions. In addition, (iv) six broilers were treated on days 20–24 by intracoelomal phenobarbital (PB) injection (Phenobarbital sodium, Ph. Eur. 7.1, dissolved in sterile, pyrogen-free and endotoxin-free physiological saline solution, applied dose: 80 mg/kg BW daily) to induce CYP activity as a positive control. Body weight was measured individually on each day of treatment, boli and PB injections were adjusted to the measured body weight per day. (Mean body weight of the animals was 0.683 ± 0.011 kg on day 20 and 0.774 ± 0.017 kg on day 24.) All animals were starved for additional 2 h after each treatment in order to enhance the absorption of butyrate. Daily body weight gain and feed intake matched the requirements of the Ross technology and no significant difference could be observed between the groups. However, the applied butyrate provided some extra energy for the treated animals (calculated mean metabolizable energy content of the boli was 2.8 kJ/animal daily at the lower and 13.9 kJ/animal daily at the higher dose), it appeared not to be relevant compared to the energy content of the diet (calculated mean metabolizable energy provided by the diet taken up was 1190 kJ/animal daily).
Liver sampling and separation of subcellular organelles
Animals were slaughtered in carbon dioxide anaesthesia by decapitation on day 24. Last treatment was conducted 2 h prior to slaughtering. After opening the coelom, the liver was exsanguinated with chilled physiological saline solution through the portal vein and was ectomized, weighed and shock-frozen immediately in liquid nitrogen.
After thawing, cell nucleus fraction was isolated from the liver of the bolus-treated and control chickens (treatments i, ii, iii) in order to examine the acetylation state of the core histones, while microsomal fractions were prepared from all animals (treatments i, ii, iii, iv) to study the hepatic CYP activity.
Subcellular organelles were isolated by differential centrifugation according to the protocol of Van der Hoeven. Microsomal total protein concentration was determined with a Bicinchoninic Acid Protein Assay Kit (Fisher Scientific, Rockford, IL, USA) on a microplate in triplicates, using bovine serum albumin (BSA) as a standard.
All cell nucleus and microsomal fractions were shock-frozen in liquid nitrogen and were stored at −80°C until further examinations.
Purified histone extracts were isolated by a Histone Purification Mini Kit (Active Motif, Carlsbad, CA, USA) from cell nucleus fractions according to the manufacturer’s protocol. During the whole purification procedure kit reagents prevented further deacetylase activity to ensure acetylation status as in vivo.
Equal volume of ice-cold Extraction Buffer was added to the nucleus suspension. After homogenization, samples were incubated overnight at 4°C on a rotating platform. Tubes were centrifuged at maximum speed (30,000 g) for 5 min in a microfuge, and the supernatant, considered as the crude histone extract, was neutralized with one-fourth volume of 5x Neutralization Buffer (pH 8.0). Neutralized extract was loaded onto previously equilibrated histone isolation spin columns. After 3 washing steps with Wash Buffer, histones were eluted and precipitated overnight from the flow-through by 4% perchloric acid. Precipitate was sedimented by centrifugation at 30,000 g for 60 min, the pellet was washed at first with 4% perchloric acid, later with acetone, containing 0.2% HCl and finally with pure acetone. Histones were resuspended in sterile distilled water and the yield of total core histone proteins was quantified by measuring the absorbance at 230 nm.
Western blot analysis
Electrophoresis and western blotting were performed according to the instructions of the applied Acetyl Histone Antibody Sampler Kit (Cell Signaling, MA, USA). Histone preparations were diluted by SDS- and mercaptoethanol-containing loading buffer (supplemented with 50 mM dithiothreitol), sonicated for 15 sec in order to reduce viscosity and proteins were heat denatured at 95°C for 5 min. Histones were separated by SDS-PAGE on polyacrylamide (4-20%) precast gradient gels (Biorad Laboratories, CA, USA), the amount of loaded protein was 3 μg per lane for the detection of histones H2A and H3, while 6 μg per lane for histones H2B and H4. After tank blotting of proteins onto nitrocellulose membranes (0.2 μm pore size, Biorad Laboratories, CA, USA), histones were identified by immunodetection using antibodies of the Acetyl Histone Antibody Sampler Kit: after blocking with 5% fat-free milk-containing PBST for 2 h, the immunoblots were incubated overnight with primary antibodies against histone H2A (1:1000), H2B (1:500), H3 (1:1000), H4 (1:500) and their acetylated forms. Each acetyl histone antibody was specific for the target histone modified at the lysine residue of the most frequent acetylation site (H2A and H2B: Lys 5, H3: Lys 9, H4: Lys 8). Detection of the primary antibody was performed using an anti-rabbit secondary antibody (1:2000) coupled with horseradish peroxidase. Primary antibodies were diluted in PBST, containing 5% BSA, while secondary antibodies in PBST, containing 5% fat-free milk. Bands were detected by the Chemidoc XRS enhanced chemiluminescence system (Biorad Laboratories, CA, USA). Membranes were finally stained by Indian Ink to detect all the separated proteins. Band intensities were quantified by the Quantity One 1-D Analysis software (Biorad Laboratories, CA, USA), trace quantities were standardized to the Indian Ink stained bands to ensure equal loading. Acetylation ratios were determined considering relative protein expression levels of each histone and its acetylated form.
All western blot examinations were carried out in duplicates. Regarding histone H3, due to their different molecular mass, trace quantities of bands representing H3.1 and H3.2 isoforms could be measured separately, but the acetylation state was calculated from the total amount of H3 and acetyl-H3.
Enzyme assays on hepatic microsomal CYP activity
Aminopyrine N-demethylation assay
Microsomal CYP2H/CYP3A37 activity was screened by the aminopyrine N-demethylation assay, in which formaldehyde production could be measured by the spectrophotometric method of Nash. The enzyme assay was performed according to the modified protocol of García-Agúndez et al.. The reaction mixture contained an NADPH+H+-regenerating cofactor mixture, prepared from 0.5 mM NADPH+H+ (Reanal Private Ltd., Budapest, Hungary), 50 mM glucose 6-phosphate, 4 IU/l glucose 6-phosphate dehydrogenase, 5 mM MgCl2 and 50 mM semicarbazide.
After thawing on ice, 100 μl microsomal suspension was incubated with 200 μl cofactor mixture and 900 μl 0.05 M phosphate buffer (pH 7.4) in the presence of different concentrations (0, 1.25, 2.5, 5, 10 mM) of dimethylamino-antipyrine (aminopyrine) for 10 min at 37°C. The reaction was stopped by adding 200 μl 20% trichloroacetic acid. After centrifugation at 4,500 g for 10 min, 400 μl Nash reagent (0.16 ml acetyl acetone and 0.24 ml concentrated acetic acid in 20 ml of 4 M ammonium acetate solution) was added to 800 μl of the supernatant. The mixture was incubated at 60°C for 30 min, cooled down on ice and the absorbance was measured spectrophotometrically at 415 nm against reagent blank. Results were corrected by subtracting the absorbance of an inhibited blank per each substrate concentration (inhibited previously by adding 20% trichloroacetic acid). Formaldehyde standard curves were determined under the same conditions as used for microsomal activity measurements; each sample was examined in triplicates. Finally, mean specific enzyme activity (reaction velocity), maximal reaction velocity (Vmax) and the Michaelis-Menten’s constant (KM) were calculated and compared between groups. All results were standardized according to the total protein concentration of microsomal samples.
CYP2H activity was measured by aniline-hydroxylation assay. The enzyme assay was carried out according to the modified protocol of Murray and Ryan. The reaction mixture contained an NADPH+H+-regenerating cofactor mixture with the same composition as for the aminopyrine N-demethylation assay. After thawing on ice, 100 μl microsomal suspension was incubated with 200 μl cofactor mixture and 900 μl 0.05 M phosphate buffer (pH 7.4) and different concentrations (0, 1.25, 2.5, 5, 10 mM) of aniline hydrochloride for 15 min at 37. The reaction was terminated by adding 200 μl 20% trichloroacetic acid. Following centrifugation at 4,500 g for 10 min, 400 μl 10% Na2CO3 solution and 400 μl alkaline phenol solution (0.8% phenol solution in 0.2 M NaOH) were added to 400 μl of the supernatant. The mixture was incubated at 37°C for 30 min, cooled down on ice and the absorbance was measured by spectrophotometer at 605 nm against reagent blank. An inhibited blank was approved for each substrate concentration similarly to the aminopyrine N-demethylation assay. To determine the amount of the produced 4-aminophenol, standard curves were prepared; each sample was examined in triplicates. Mean specific enzyme activity, Vmax and KM values were also determined and compared between groups. All results were standardized according to the total protein concentration of microsomal samples.
All values are expressed as means ± SEM. Statistical analysis of data was performed with R 2.14.0 software (downloaded fromhttp://cran.r-project.org/bin/windows/base/old/2.14.0/ on 14 December 2011), one-tailed non-parametric Mann-Whitney’s test and one-way ANOVA were approved for comparison of results of the treated groups with those of controls. Level of significance was set at P<0.05.
Results and discussion
Acetylation of hepatic core histones
Screening of the important acetylation sites of core histones showed that butyrate treatment in bolus at the lower dose (0.25 g/kg BW) tended to increase acetylation of histone H2A at lysine 5 (P=0.063), and the higher applied dose (1.25 g/kg BW) caused significant, approximately twofold increase in acetylation (P=0.048) compared to the control group at the same acetylation site of H2A (Figure1A and Figure2).
Confirming this finding, butyrate induced hyperacetylation of H2A in colonic epithelial cell culture in vitro. Acetylation of H2A is of special importance since its acetylation state is highly involved in conformational changes of the nucleosome and decreased histone-DNA interactions, working synergistically with acetylation of the N-terminal histone tails[36, 37].
In contrast, butyrate bolus did not influence the acetylation of histone H2B at lysine 5 with the lower (P=0.274) nor the higher dose of butyrate (P=0.714) (Figure1B and Figure2). There are still some other lysine residues in H2B, which may be potential targets of HDAC inhibitors, and possible effects of butyrate on these other acetylation sites cannot be excluded.
There was no significant difference in the acetylation ratio of total histone H3 at lysine 9 after the application of butyrate in the lower dose (P=0.146). However, higher dose of butyrate caused relevant, approximately 18-fold increased H3 acetylation ratio (P=0.009) (Figure1C and Figure2). Hyperacetylation of H3 after butyrate exposure was reported by several in vitro studies in a variety of cultured mammalian cells, but not yet described in vivo. It was found already in 1973 that butyrate in millimolar concentrations caused hyperacetylation of H3 and H4 in all examined vertebrate cell lines, while H2A and H2B were also affected in certain rat-derived cell cultures. Butyrate-induced dynamic histone acetylation was compared between mammalian and avian cells in vitro, where huge amount of highly acetylated H3 isoforms was found after butyrate treatment in human breast cancer cells, in contrast of terminally differentiated avian immature erythrocytes, 2% of which participated in the acetylation process. Among the many acetylation sites, in agreement with our results, it was recently described that butyrate induced H3 hyperacetylation first of all at lysine 9, an acetylation site that plays a critical role in the epigenetic regulation of cell function. Since this acetylation site is linked to histone phosphorylation and methylation processes, these site-specific modifications together can cause distinct chromatin alterations and cell cycle modifications.
The H3 isoforms H3.1 and H3.2 could be also separated on the immunoblots and it was found that butyrate increased the relative protein expression level of the H3.1 isoform, which was poorly expressed in control animals, but was detected in high amount in both butyrate-treated groups. The difference in the relative protein expression level of H3.1 between the control and butyrate-treated groups was considered to be significant after the application of the lower dose (P=0.021) and a near-significant trend following treatment with the higher dose (P=0.090) of butyrate. It is known that three H3 variants (H3.1, H3.2, H3.3) do exist in mammals, specifically, H3.1 is involved in both chromatin activation and repression, while H3.2 plays an important role in gene repression and H3.3 is especially enriched in active marks. Unlike in the case of mammals, only H3.1 and H3.2 could be separated from chicken cells. Due to the pleiotropic effect of H3.1 on transcription, increased protein expression level of H3.1 after butyrate treatment, detected in our present study, may be also of special importance.
Regarding the acetylation of histone H4 at lysine 8, butyrate tended to induce hyperacetylation at the lower administered dose (P=0.063) (Figure1D and Figure2). Similarly to H3, H4 is also a highly involved target of butyrate-induced hyperacetylation in cell cultures. It is known that acetylation and deacetylation of H4 is a well-coordinated process, and butyrate-induced tetra- and tri-acetylated forms of H4 are always acetylated at lysine 8. Therefore, the lysine residue examined in this study is considered as one of the most important acetylation sites of H4. It was recently also stated that H3 at lysine 9 and H4 at lysine 8 are critical targets of butyrate-induced histone hyperacetylation, which process is associated with the G-protein-coupled receptor-41, also activated by butyrate. Interestingly, the acetylation ratio of H4 after force-feeding with the higher dose of butyrate was not increased significantly compared to the control group (P=0.210) (Figure1D and Figure2). Butyrate can also alter the activity of HAT enzymes, and this contradictory finding may be in association with the pleiotropic effects of butyrate on HAT and HDAC, depending also on the dose of butyrate.
Very little data can be found in literature regarding the in vivo effects of butyrate on the chromatin structure. In a recent study, significant increase in total histone acetylation was reported in the caecal tissue of pigs after receiving orally administered lactulose, which was intensively fermented to butyrate in the large bowel.
It is also interesting to compare the present results after butyrate application in bolus with our recent experiment, where butyrate was applied as a nutritional supplement for broiler chickens for three weeks at the concentration of 1.5 g/kg diet. Dosage of butyrate as a supplement was approximately equivalent with the lower dose bolus (0.25 g/kg BW) in the present study. The most important difference between the treatments is that the administration of butyrate in bolus after overnight starvation provides a short-term supply of greater amount of butyrate for the hepatocytes. In the earlier experiment animals could take up butyrate-supplemented diet the whole day, but this uptake might be followed by a prolonged absorption and a long-acting butyrate exposure of the liver.
In both experiments, hyperacetylation of H2A at lysine 5 was found and no dose-dependency could be detected after bolus treatment. In spite of these results, it can be stated that butyrate did not affect the acetylation state of histone H2B at lysine 5 after butyrate administration in bolus, nor in the nutritional supplement study. Similarly to our earlier experiment, where butyrate was applied as a nutritional supplement, the lower dose of butyrate bolus did not cause any changes in the acetylation of histone H3 at lysine, but the higher dose induced a highly relevant hyperacetylation of H3 at lysine 9. Due to the key-role of H3 modifications in gene expression[39, 40], this action seems to be a very important change in the epigenetic regulation of transcription. Lower dose of butyrate tended to increase acetylation of H4 at lysine 8, differing from the nutritional supplement experiment, underlining the critical role of the application.
We can summarize that orally applied butyrate in bolus influenced hepatic histone acetylation in vivo, core histones H2A, H3 and H4 were involved in this partly dose-dependent action. Since butyrate modified the chromatin structure, it can be considered as an important epigenetic effector on gene expression of hepatocytes. Therefore, hepatic CYP activity was measured as key surrogate to assess changes in gene expression and subsequently, function.
Activity of hepatic microsomal CYP enzymes
We hypothesized that butyrate-induced histone modifications might cause changes in hepatic CYP activity; because it was reported that histone acetylation had a huge impact on gene expression of several members of the CYP2 family. It is also known that alterations in histone H3 acetylation are involved in the expression of CYP3A subfamily in the adult mouse. However, in our experiment, butyrate-induced epigenetic changes of chromatin structure did not result in changes of enzyme activity.
Screening the aminopyrine N-demethylation activity of hepatic microsomal fractions, catalyzed by CYP2H and CYP3A37 enzymes, no significant difference was found between the mean enzyme activity (reaction velocity) of the butyrate-treated animals and those of controls (lower dose: P=0.196, higher dose: P=0.523) (Figure3A). Similarly, administration of butyrate bolus caused no significant differences in the Vmax values, independently of the applied dose (lower dose: P=0.368, higher dose: P=0.911). The lower concentration of butyrate did not affect the KM value (P=0.713), but the higher dose tended to decrease it (P=0.095), however, due to high standard error of mean it can be considered only as a near-significant trend (Table2).
As an enzyme inductor, PB treatment caused notable enzyme induction with significantly increased mean reaction velocity (P=0.003) (Figure3A) and Vmax values (P=0.009), but did not influence the KM (P=0.878) of the reaction (Table2).
In agreement with these results, butyrate treatment in bolus did not alter the aniline-hydroxylation activity of the liver, specific for the microsomal CYP2H subfamily. No significant difference was found in the mean enzyme activity (lower dose: P=0.211, higher dose: P=0.848) (Figure3B), Vmax (lower dose: P=0.700, higher dose: P=0.640) and KM (lower dose: P=0.354, higher dose: P=0.542) values (Table2) between control and butyrate-stimulated chickens, independently of the applied dose.
These data are in agreement with our previous results, where we found that butyrate as a feed supplement did not alter the activity of hepatic CYP2H and CYP3A37 enzymes in chicken. Now, on the basis of our previous and recent results, it can be stated, that independently of the form of application and the applied dose, alimentary butyrate did not modify the activity of the examined CYP enzymes under physiological conditions.
However, butyrate’s potential effects on other CYP subfamilies cannot be excluded. It is also not clear, whether under special dietary conditions or simultaneously applied with other agents, such as xenobiotics, butyrate may modify the liver enzymes of biotransformation. For example, dietary supplementation of inulin, a precursor of colonic butyrate production, in rats, suffering from high-fat-diet-induced hyperlipidaemia and hepatic steatosis, counteracted the decrease in the expression and activity of hepatic CYP1A1/2 and CYP2E1 enzymes.
The present study indicated that (1) orally applied butyrate in bolus had an impact on chromatin structure of hepatocytes in chicken in the early post-hatch period: independently of the dose, butyrate caused hyperacetylation of histone H2A, but no changes were observed in the acetylation state of H2B. The higher administered dose (1.25 g/kg BW) induced an intensive hyperacetylation of H3, while the application of the lower dose (0.25 g/kg BW) tended to increase acetylation ratio of H4. In addition, both treatments with butyrate bolus increased the expression of the H3.1 isoform. (2) These changes in the epigenetic regulation of cell function did not result in alteration of drug-metabolizing hepatic CYP2H and CYP3A37 enzyme activity, so there might be no relevant pharmacoepigenetic influences of orally applicated butyrate under physiological conditions.
Results of this and former studies indicate that growing chicken are a suitable model to evaluate the epigenetic effects of orally applied butyrate both by diet and by intra-crop application. Due to low endogenous butyrate production the histone acetylation is most likely derived from exogenous butyrate directly. Although this is a strictly descriptive study, this chicken model provides a high potential to identify butyrate-induced epigenetic mechanisms and their consequences in metabolic regulation in future.
Apparent metabolizable energy
Bovine serum albumin
Ethylene diamino tetraacetic acid
Nicotinamide adenine dinucleotide phosphate (reduced form)
Phosphate buffered saline supplemented with Tween
Short chain fatty acids
Maximal reaction velocity.
Bergman FN: Energy contributions of volatile fatty acids from the gastrointestinal tract in various species. Physiol Rev. 1990, 70: 567-590.
Roediger WE: Utilization of nutrients by isolated epithelial cells of the rat colon. Gastroenterology. 1982, 83: 424-429.
Gálfi P, Neogrády S: The pH-dependent inhibitory action of n-butyrate on gastrointestinal epithelial cell division. Food Res Int. 2002, 34: 581-586.
Medina V, Edmonds B, Young GP, James R, Appleton S, Zalewski PD: Induction of caspase-3 protease activity and apoptosis by butyrate and trichostatin A (inhibitors of histone deacetylase): dependence on protein synthesis and synergy with a mitochondrial/cytochrome c-dependent pathway. Cancer Res. 1997, 57: 3697-3707.
Leu RKL, Hu Y, Brown IL, Young GP: Effect of high amylose maize starches on colonic fermentation and apoptotic response to DNA-damage in the colon of rats. Nutr Metab. 2009, 6: 11-10.1186/1743-7075-6-11.
Butyrate and the human cancer cell. Edited by: Young GP, Gibson PR. 1995, Cambridge: Cambridge University Press
McIntyre A, Gibson PR, Young GP: Butyrate production from dietary fibre and protection against large bowel cancer in a rat model. Gut. 1993, 34: 386-391. 10.1136/gut.34.3.386.
Le Leu RK, Brown IL, Hu Y, Morita T, Esterman A, Young GP: Effect of dietary resistant starch and protein on colonic fermentation and intestinal tumourigenesis in rats. Carcinogenesis. 2007, 28: 240-245.
Ricke SC: Perspectives on the use of organic acids and short chain fatty acids as antimicrobiols. Poultry Sci. 2003, 82: 632-639.
Fernández-Rubio C, Ordónez C, Abad-González J, Garcia-Gallego A, Pilar Honrubia M, Jose Mallo J, Balana-Fouce R: Butyric acid based feed additives help protect broiler chickens from Salmonella enteritidis infection. Poultry Sci. 2008, 88: 943-948.
Candela M, Maccaferri S, Turroni S, Carnevali P, Brigidi P: Functional intestinal microbiome, new frontiers in prebiotic design. Int J Food Microbiol. 2010, 140: 93-101. 10.1016/j.ijfoodmicro.2010.04.017.
Gálfi P, Bokori J: Feeding trial in pigs with a diet containing sodium n-butyrate. Acta Vet Hung. 1990, 38: 3-17.
Hu Z, Guo Y: Effects of dietary sodium butyrate supplementation on the intestinal morphological structure, absorptive function and gut flora in chickens. Anim Feed Sci Tech. 2007, 132: 240-249. 10.1016/j.anifeedsci.2006.03.017.
Phillips I: Withdrawal of growth-promoting antibiotics in Europe and its effects in relation to human health. Int J Antimicrob Ag. 2007, 30: 101-107. 10.1016/j.ijantimicag.2007.02.018.
Biancotto C, Frigè G, Minucci S: Histone modification therapy of cancer. Adv Genet. 2010, 70: 341-386.
Davie JR: Inhibition of histone deacetylase activity by butyrate. J Nutr. 2003, 133: 2485S-2493S.
Candido EPM, Reeves R, Davie JR: Sodium butyrate inhibits histone deacetylation in cultured cells. Cell. 1978, 14: 105-113. 10.1016/0092-8674(78)90305-7.
Kien CL, Peltier CP, Mandal S, Davie JR, Blauwiekel R: Effects of the in vivo supply of butyrate on histone acetylation of cecum in piglets. JPEN-Parenter Enter. 2008, 32: 51-56. 10.1177/014860710803200151.
Guilloteau P, Martin L, Eeckhaut V, Ducatelle R, Zabielski R, Van Immerseel F: From gut to the peripheral tissues: the multiple effects of butyrate. Nutr Res. 2010, 23: 366-384. 10.1017/S0954422410000247.
Velázquez OC, Lederer HM, Rombeau JL: Butyrate and the colonocyte. Production, absorption, metabolism, and therapeutic implications. Adv Exp Med Biol. 1997, 427: 123-134. 10.1007/978-1-4615-5967-2_14.
Demigné C, Yacoub C, Rémésy C: Effects of absorption of large amounts of volatile fatty acids on rat liver metabolism. J Nutr. 1986, 116: 77-86.
Bloemen JG, Venema K, van de Poll MC, Olde Damink SW, Buurman WA, Dejong CH: Short chain fatty acids exchange across the gut and liver in humans measured at surgery. Clin Nutr. 2009, 28: 657-661. 10.1016/j.clnu.2009.05.011.
Beauvieux MC, Tissier P, Gin H, Canioni P, Gallis JL: Butyrate impairs energy metabolism in isolated perfused liver of fed rats. J Nutr. 2001, 131: 1986-1992.
Gallis JL, Tissier P, Gin H, Beauvieux MC: Decrease in oxidative phosphorylation yield in presence of butyrate in perfused liver isolated from fed rats. BMC Physiol. 2007, 7: 8-10.1186/1472-6793-7-8.
Gallis JL, Gin H, Roumes H, Beauvieux MC: A metabolic link between mitochondrial ATP synthesis and liver glycogen metabolism: NMR study in rats re-fed with butyrate and/or glucose. Nutr Metab. 2011, 8: 38-10.1186/1743-7075-8-38.
Baer-Dubowska W, Majchrzak-Celinska A, Cichocki M: Pharmacoepigenetics: a new approach to predicting individual drug responses and targeting new drugs. Pharmacol Rep. 2011, 63: 293-304.
Dannenberg LO, Edenberg HJ: Epigenetics of gene expression in human hepatoma cells: expression profiling the response to inhibition of DNA methylation and histone deacetylation. BMC Genomics. 2006, 7: 181-10.1186/1471-2164-7-181.
Sugatani J, Sadamitsu S, Wada T, Yamazaki Y, Ikari A, Miwa M: Effects of dietary inulin, statin, and their co-treatment on hyperlipidemia, hepatic steatosis and changes in drug-metabolizing enzymes in rats fed a high-fat and high-sucrose diet. Nutr Metab. 2012, 9: 23-10.1186/1743-7075-9-23.
Snel J, Harmsen HJM, Van der Wielen PWJJ, Williams BA: Dietary strategies to influence thegastrointestinal microflora of young animals and its potential to improve intestinal health. Nutrition and Health of the Gastrointestinal Tract. Edited by: Blok MC, Vahl HA, Lange L, Braak AE, Homko G, Hessing M. 2000, Wageningen: Wageningen Academic Publishers, 37-60.
Ross Broiler Management Manual: 2009,http://www.poultryhub.org/wp-content/uploads/2012/06/Ross_US_Broiler_Manual_09.pdf,
Van der Hoeven TA, Coon MJ: Preparation and properties of partially purified cytochrome P-450 and reduced nicotinamide adenine dinucleotide phosphate-cytochrome P-450 reductase from rabbit liver microsomes. J Biol Chem. 1974, 249: 6302-6310.
Nash T: The colorimetric estimation of formaldehyde by means of the Hantzsch reaction. Biochem J. 1953, 55: 416-421.
García-Agúndez JA, Luengo A, Benítez J: Aminopyrine N-demethylase activity in human liver microsome. Clin Pharmacol Ther. 1990, 48: 490-495. 10.1038/clpt.1990.184.
Murray M, Ryan AJ: Inhibition and enhancement of mixed-function oxidases by nitrogen heterocycles. Biochem Pharmacol. 1982, 31: 3002-3005. 10.1016/0006-2952(82)90278-7.
Tobisawa Y, Imai Y, Fukuda M, Kawashima H: Sulfation of colonic mucins by N-acetylglucosamine 6-O-sulfotransferase-2 and its protective function in experimental colitis in mice. J Biol Chem. 2010, 285: 6750-6760. 10.1074/jbc.M109.067082.
Ishibasi T, Dryhurst D, Rose KL, Shabanowitz J, Hunt DF, Ausio J: Acetylation of vertebrate H2A.Z and its effect on the structure of the nucleosome. Biochemistry-US. 2009, 48: 5007-5017. 10.1021/bi900196c.
Brower-Toland B, Wacker DA, Fulbright RM, Lis JT, Kraus WL, Wang MD: Specific contributions of histone tails and their acetylation to the mechanical stability of nucleosomes. J Mol Biol. 2005, 346: 135-146. 10.1016/j.jmb.2004.11.056.
Zhang K, Williams KE, Hunag L, Yau P, Siino JS, Bradbury EM, Jones PR, Minch MJ, Burlingame AL: Histone acetylation and deacetylation. Mol Cell Proteomics. 2002, 1: 500-508. 10.1074/mcp.M200031-MCP200.
Shin J, Li R, Gao Y, Baldwin R, Li C: Genome-wide ChIP-seq mapping and analysis reveal butyrate-induced acetylation of H3K9 and H3K27 correlated with transcription activity in bovine cells. Funct Integr Genomics. 2012, 12: 119-130. 10.1007/s10142-012-0263-6.
Mathew OP, Ranganna K, Yatsu FM: Butyrate, an HDAC inhibitor, stimulates interplay between different posttranslational modifications of histone H3 and differently alters G1-specific cell cycle proteins in vascular smooth muscle cells. Biomed Pharmacother. 2010, 64: 733-740. 10.1016/j.biopha.2010.09.017.
Hake SB, Garcia BA, Duncan EM, Kauer M, Dellaire G, Shabanowitz J, Bazett-Jones DP, Allis CD, Hunt DF: Expression patterns and post-translational modifications associated with mammalian histone H3 variants. J Biol Chem. 2006, 281: 559-568.
Zhang K, Tang H, Huang L, Blankenship JW, Jones PR, Xiang F, Yau PM, Burlingame AL: Identification of acetylation and methylation sites of histone H3 from chicken erythrocytes by high-accuracy matrix-assisted laser desorption ionization-time-of-flight, matrix-assisted laser desorption ionization-postsource decay, and nanoelectrospray ionization tandem mass spectrometry. Anal Biochem. 2002, 306: 259-269. 10.1006/abio.2002.5719.
Wu J, Zhou Z, Hu Y, Dong S: Butyrate-induced GPR41 activation inhibits histone acetylation and cell growth. J Genet Genomics. 2012, 39: 375-384. 10.1016/j.jgg.2012.05.008.
Rada-Iglesias A, Enroth S, Ameur A, Koch CM, Clelland GK, Respuela-Alonso P, Wilcox S, Dovey OM, Ellis PD, Langford CF, Dunham I, Komorowski J, Wadelius C: Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes. Genome Res. 2007, 17: 708-719. 10.1101/gr.5540007.
Mátis G, Neogrády Z, Csikó G, Gálfi P, Fébel H, Jemnitz K, Veres Z, Kulcsár A, Kenéz Á, Huber K: Epigenetic effects of dietary butyrate on hepatic histone acetylation and enzymes of biotransformation in chicken. Acta Vet Hung. in press
Li Y, Cui Y, Hart SN, Klassen CD, Zhong XB: Dynamic patterns of histone methylation are associated with oncogenic expression of the CYP3A4 genes during mouse liver maturation. Mol Pharmacol. 2009, 75: 1171-1179. 10.1124/mol.108.052993.
Special thanks to Éva Fejes and Zsolt Wagner (Institute of Pharmacodynamics, Faculty of Pharmacology, Semmelweis University, Budapest, Hungary) for their help in the microsome isolation and to Kathrin Hansen (Department of Physiology, University of Veterinary Medicine, Hannover, Germany) for her help in the western blotting. The excellent assistance of our colleagues and students Janka Petrilla, Kata Annus, Tünde Benedek, Daniella Nyáry and Dániel Pleva (Department of Physiology and Biochemistry, Faculty of Veterinary Science, Szent István University, Budapest, Hungary) in the care for the animals and in the sampling is gratefully acknowledged. Thanks to Ferenc Mátis for his technical support in editing the figures.
The authors declare that they have no competing interests.
GM designed and carried out animal treatments and sampling, prepared the cell nucleus and microsomal fractions, conducted western blot examinations and enzyme assays and drafted the manuscript. ZsN conceived and designed the study, carried out sampling and revised the manuscript, GyCs designed the study, carried out sampling, analyzed data and revised the manuscript, AK carried out animal treatments and sampling, conducted enzyme assays and analyzed data. ÁK carried out sampling and prepared the cell nucleus and microsomal fractions, KH conducted the western blot examinations, analyzed data and revised the manuscript. All authors read and approved the final version of the manuscript.
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Mátis, G., Neogrády, Z., Csikó, G. et al. Effects of orally applied butyrate bolus on histone acetylation and cytochrome P450 enzyme activity in the liver of chicken – a randomized controlled trial. Nutr Metab (Lond) 10, 12 (2013) doi:10.1186/1743-7075-10-12
- Short chain fatty acids
- Histone deacetylase inhibitor
- Histone hyperacetylation
- Cytochrome P450 enzymes